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Genome analyis : current procedures and applications /

"In this book, an impressive array of expert authors highlight and review current advances in genome analysis. This volume provides an invaluable, up-to-date and comprehensive overview of the methods currently employed for next-generation sequencing (NGS) data analysis, highlights their problem...

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Bibliographic Details
Other Authors: Poptsova, Maria S. (Editor)
Format: Electronic eBook
Language:English
Published: Wymondham : Caister Academic, [2014]
Subjects:
Gene mapping.
Sequence Analysis, RNA > methods
Sequence Analysis, DNA > methods
Chromosome Mapping > methods
Base Sequence
Chromosome Mapping
Online Access: Full text (MFA users only)
ISBN:9781908230683
1908230681
Local Note:ProQuest Ebook Central
Table of Contents:
  • Identification of structural variation
  • Methods for RNA isolation, characterization and sequencing (RNA-Seq)
  • Transcriptome reconstruction and quantification from RNA sequencing data
  • Identification of small interfering RNA from next-generation sequencing data
  • Motif discovery and motif finding in ChIP-Seq Data
  • Mammalian enhancer prediction
  • DNA patterns for nucleosome positioning
  • Hypermethylation in cancer
  • Identification and analysis of transposable elements in genomic sequences
  • The current state of metagenomic analysis
  • Metatranscriptomics
  • Inferring viral quasispecies spectra from shotgun and amplicon next-generation sequencing reads
  • DNA instability in bacterial genomes: causes and consequences
  • Comparative methods for RNA structure prediction
  • Context-free grammars and RNA secondary structure prediction
  • Stochastic context-free grammars and RNA secondary structure prediction.

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